Health and Medicine
From Just Solve the File Format Problem
				
								
				
				
																
				
				
								
				Contents | 
Biomedical signals (time series)
- ACQ (AcqKnowledge)
 - BCI2000 (The BCI2000 project)
 - BioSemi (BDF) data format
 - BKR (EEG data format)
 - CFWB (Chart Data File Format)
 - DICOM-Waveform (An extension of Dicom for storing waveform data)
 - ecgML (A markup language for electrocardiogram data acquisition and analysis)
 - EDF/EDF+ (European Data Format)
 - FEF (File Exchange Format for Vital signs, CEN TS 14271)
 - General Data Format for Biosignals
 - HL7aECG (Health Level 7 v3 annotated ECG)
 - MEF (Multiscale Electrophysiology File Format)
 - OpenXDF (Open Exchange Data Format)
 - SCP-ECG (Standard Communication Protocol for Computer assisted electrocardiography)
 - SIGIF (A digital SIGnal Interchange Format)
 - WFDB (Format of Physiobank)
 
Genetic data
See Scientific Data formats#Biological for more formats
Medical Imaging
- Analyze AVW
 - Aperio SVS
 - BioRad confocal image
 - BRIK/HEAD (Voxel data from AFNI programs, dual-file (data and metadata, repectively))
 - DeltaVision
 - DICOM (Digital Imaging and Communications in Medicine (.dcm))
 - gii (NIfTI offspring for brain surface data, single-file (combined data and meta-data) style)
 - IMG/HDR (ANALYZE or NIfTI voxel data, dual-file (separate data and metadata, respectively))
 - MGH (uncompressed)
 - MGZ (zip-compressed)
 - MINC (Medical Imaging NetCDF format; since version 2.0, based on HDF5 (.mnc))
 - MRC (Medical Research Council)
 - NII (Neuroimaging Informatics Technology Initiative (NIfTI) voxel data, single-file (combined data and metadata))
 - OME-TIFF (Open Microscopy Imaging format)
 - OME-XML (Open Microscopy Imaging format)
 - OST (Open Spatio-Temporal) (extensible, open alternative for microscope images)
 - SDM (Signed Differential Mapping- brain maps(.sdm))
 - TRK (Vector data describing tracts of neurons, used by TrackVis)
 
Medical Record Keeping and Transaction Processing
Optical
- Eyeglass file format (Ross Spencer) - file format invented by digital preservation researcher to demonstrate how to create file formats