Health and Medicine
From Just Solve the File Format Problem
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== Medical Imaging == | == Medical Imaging == | ||
| + | * [[Analyze AVW]] | ||
* [[BRIK/HEAD]] (Voxel data from AFNI programs, dual-file (data and metadata, repectively)) | * [[BRIK/HEAD]] (Voxel data from AFNI programs, dual-file (data and metadata, repectively)) | ||
| + | * [[DICOM]] (Digital Imaging and Communications in Medicine (.dcm)) | ||
| + | * [[gii]] (NIfTI offspring for brain surface data, single-file (combined data and meta-data) style) | ||
| + | * [[IMG/HDR]] (ANALYZE or NIfTI voxel data, dual-file (separate data and metadata, respectively)) | ||
* [[MGH]] (uncompressed) | * [[MGH]] (uncompressed) | ||
* [[MGZ]] (zip-compressed) | * [[MGZ]] (zip-compressed) | ||
| − | |||
* [[MINC]] (Medical Imaging NetCDF format; since version 2.0, based on HDF5 (.mnc)) | * [[MINC]] (Medical Imaging NetCDF format; since version 2.0, based on HDF5 (.mnc)) | ||
| + | * [[NII]] (Neuroimaging Informatics Technology Initiative (NIfTI) voxel data, single-file (combined data and metadata)) | ||
* [[OME-TIFF]] (Open Microscopy Imaging format) | * [[OME-TIFF]] (Open Microscopy Imaging format) | ||
* [[OME-XML]] (Open Microscopy Imaging format) | * [[OME-XML]] (Open Microscopy Imaging format) | ||
* [[OST (Open Spatio-Temporal)]] (extensible, open alternative for microscope images) | * [[OST (Open Spatio-Temporal)]] (extensible, open alternative for microscope images) | ||
| − | |||
| − | |||
| − | |||
| − | |||
* [[SDM]] (Signed Differential Mapping- brain maps(.sdm)) | * [[SDM]] (Signed Differential Mapping- brain maps(.sdm)) | ||
| + | * [[TRK]] (Vector data describing tracts of neurons, used by TrackVis) | ||
Revision as of 15:36, 11 January 2014
Biomedical signals (time series)
- ACQ (AcqKnowledge)
- BCI2000 (The BCI2000 project)
- BioSemi (BDF) data format
- BKR (EEG data format)
- CFWB (Chart Data File Format)
- DICOM-Waveform (An extension of Dicom for storing waveform data)
- ecgML (A markup language for electrocardiogram data acquisition and analysis)
- EDF/EDF+ (European Data Format)
- FEF (File Exchange Format for Vital signs, CEN TS 14271)
- GDF v1.x (General Data Format for biomedical signals - Version 1.x)
- GDF v2.x (The General Data Format for biomedical signals - Version 2.x)
- HL7aECG (Health Level 7 v3 annotated ECG)
- OpenXDF (Open Exchange Data Format)
- SCP-ECG (Standard Communication Protocol for Computer assisted electrocardiography)
- SIGIF (A digital SIGnal Interchange Format)
- WFDB (Format of Physiobank)
Genetic data
Medical Imaging
- Analyze AVW
- BRIK/HEAD (Voxel data from AFNI programs, dual-file (data and metadata, repectively))
- DICOM (Digital Imaging and Communications in Medicine (.dcm))
- gii (NIfTI offspring for brain surface data, single-file (combined data and meta-data) style)
- IMG/HDR (ANALYZE or NIfTI voxel data, dual-file (separate data and metadata, respectively))
- MGH (uncompressed)
- MGZ (zip-compressed)
- MINC (Medical Imaging NetCDF format; since version 2.0, based on HDF5 (.mnc))
- NII (Neuroimaging Informatics Technology Initiative (NIfTI) voxel data, single-file (combined data and metadata))
- OME-TIFF (Open Microscopy Imaging format)
- OME-XML (Open Microscopy Imaging format)
- OST (Open Spatio-Temporal) (extensible, open alternative for microscope images)
- SDM (Signed Differential Mapping- brain maps(.sdm))
- TRK (Vector data describing tracts of neurons, used by TrackVis)
