VCF

From Just Solve the File Format Problem
(Difference between revisions)
Jump to: navigation, search
(Specifications)
 
(3 intermediate revisions by one user not shown)
Line 1: Line 1:
 +
:''This page is about the Variant Call Format; see [[vCard]] for the VCF format used for address book entries.'''
 
{{FormatInfo
 
{{FormatInfo
 
|formattype=electronic
 
|formattype=electronic
Line 6: Line 7:
  
 
== Specifications ==
 
== Specifications ==
 +
* [https://samtools.github.io/hts-specs/VCFv4.1.pdf Version 4.1 Specification]
 
* [https://samtools.github.io/hts-specs/VCFv4.2.pdf Version 4.2 Specification]
 
* [https://samtools.github.io/hts-specs/VCFv4.2.pdf Version 4.2 Specification]
 
* [https://samtools.github.io/hts-specs/VCFv4.3.pdf Version 4.3 Specification]
 
* [https://samtools.github.io/hts-specs/VCFv4.3.pdf Version 4.3 Specification]
 +
* [https://samtools.github.io/hts-specs/ SAM/BAM and related specifications]
  
 
== Links ==
 
== Links ==
Line 13: Line 16:
 
* [http://www.1000genomes.org/wiki/Analysis/vcf4.0/ VCF 4.0 info]
 
* [http://www.1000genomes.org/wiki/Analysis/vcf4.0/ VCF 4.0 info]
 
* [https://globenewswire.com/news-release/2016/06/07/846681/0/en/BioNano-Announces-Adoption-of-the-Popular-VCF-Format.html BioNano Announces Adoption of the Popular VCF Format]
 
* [https://globenewswire.com/news-release/2016/06/07/846681/0/en/BioNano-Announces-Adoption-of-the-Popular-VCF-Format.html BioNano Announces Adoption of the Popular VCF Format]
 +
* [https://github.com/samtools/hts-specs HTS-Specs Github]

Latest revision as of 04:20, 19 January 2022

This page is about the Variant Call Format; see vCard for the VCF format used for address book entries.'
File Format
Name VCF
Ontology

VCF (Variant Call Format) is a data format used for mapping genomes (sequences of DNA codons in genetic material). It is text based, though its official spec states that it will likely be stored in a compressed manner.

[edit] Specifications

[edit] Links

Personal tools
Namespaces

Variants
Actions
Navigation
Toolbox